homotopy-continuation-chann.../python/hccd/homotopy_generator.py

118 lines
3.4 KiB
Python

import numpy as np
import sympy as sp
from typing import List, Callable
class HomotopyGenerator:
"""Generates homotopy functions from a binary parity check matrix."""
def __init__(self, parity_check_matrix: np.ndarray):
"""
Initialize with a parity check matrix.
Args:
parity_check_matrix: Binary matrix where rows represent parity checks
and columns represent variables.
"""
self.H_matrix = parity_check_matrix
self.num_checks, self.num_vars = parity_check_matrix.shape
self.x_vars = [sp.symbols(f'x{i+1}') for i in range(self.num_vars)]
self.t = sp.symbols('t')
self._F = self._create_F()
self._F_lambda = self._create_F_lambda(self._F)
# self._G = self._create_G(received)
# self._G_lambda = self._create_G_lambda(self._G)
# self._H = self._create_H()
# self._H_lambda = self._create_H_lambda(self._H)
# self._DH = self._create_DH()
# self._DH_lambda = self._create_DH_lambda(self._DH)
def update_received(self, received: np.ndarray):
"""Update the received vector and recompute G."""
self._G = self._create_G(received)
self._G_lambda = self._create_G_lambda(self._G)
self._H = self._create_H()
self._H_lambda = self._create_H_lambda(self._H)
self._DH = self._create_DH()
self._DH_lambda = self._create_DH_lambda(self._DH)
def _create_F(self) -> sp.MutableMatrix:
F = []
for var in self.x_vars:
F.append(1 - var**2)
for row in self.H_matrix:
term = 1
for i, bit in enumerate(row):
if bit == 1:
term *= self.x_vars[i]
F.append(1 - term)
groebner_basis = sp.groebner(F)
return sp.MutableMatrix(groebner_basis)
def _create_G(self, received) -> sp.MutableMatrix:
G = []
F_y = self._F_lambda(*received)
for f, f_y_i in zip(self._F, F_y):
G.append(f - f_y_i)
return sp.MutableMatrix(G)
def _create_H(self) -> sp.MutableMatrix:
H = []
for f, g in zip(self._F, self._G):
H.append((1 - self.t) * g + self.t * f)
return sp.MutableMatrix(H)
def _create_DH(self) -> sp.MutableMatrix:
all_vars = self.x_vars + [self.t]
DH = sp.Matrix([[sp.diff(expr, var)
for var in all_vars] for expr in self._H])
return DH
def _create_F_lambda(self, expr) -> Callable:
all_vars = self.x_vars
return sp.lambdify(all_vars, expr, 'numpy')
def _create_G_lambda(self, expr) -> Callable:
all_vars = self.x_vars
return sp.lambdify(all_vars, expr, 'numpy')
def _create_H_lambda(self, expr) -> Callable:
all_vars = self.x_vars + [self.t]
return sp.lambdify(all_vars, expr, 'numpy')
def _create_DH_lambda(self, expr) -> Callable:
all_vars = self.x_vars + [self.t]
return sp.lambdify(all_vars, expr, 'numpy')
def H(self, y):
return np.array(self._H_lambda(*y))
def DH(self, y):
return np.array(self._DH_lambda(*y))
def main():
import utility
H = utility.read_alist_file(
"/home/andreas/workspace/work/hiwi/ba-sw/codes/BCH_7_4.alist")
a = HomotopyGenerator(H)
y = np.array([0.1, 0.2, 0.9, 0.1, -0.8, -0.5, -1.0, 0])
print(a.DH(y))
if __name__ == "__main__":
main()